Different proteins bind to the butyrolactone receptor protein ARE sequence located upstream of the regulatory ccaR gene of Streptomyces clavuligerus

Molecular Microbiology
2005.0

Abstract

<jats:title>Summary</jats:title><jats:p>Cell‐free extracts from <jats:italic>Streptomyces clavuligerus</jats:italic>, purified by elution from heparin‐agarose with an ARE‐containing DNA fragment or by salt elution chromatography, bind to a 26 nt ARE sequence, for butyrolactone receptor proteins (ARE<jats:sub><jats:italic>ccaR</jats:italic></jats:sub>). This sequence, located upstream of the <jats:italic>ccaR</jats:italic> gene, encodes the activator protein CcaR required for clavulanic acid and cephamycin C biosynthesis. The binding is specific for the ARE sequence as shown by competition with a 34 nt unlabelled probe identical to the ARE sequence. A <jats:italic>brp</jats:italic> gene, encoding a butyrolactone receptor protein, was cloned from <jats:italic>S. clavuligerus</jats:italic>. Sixty‐one nucleotides upstream of <jats:italic>brp</jats:italic> another ARE sequence (ARE<jats:sub><jats:italic>brp</jats:italic></jats:sub>) was found, suggesting that Brp autoregulates its expression. Pure recombinant rBrp protein binds specifically to the ARE sequences present upstream of <jats:italic>ccaR</jats:italic> and <jats:italic>brp</jats:italic>. A <jats:italic>brp</jats:italic>‐deleted mutant, <jats:italic>S. clavuligerus Δbrp::neo</jats:italic>1, produced 150–300% clavulanic acid and 120–220% cephamycin C as compared with the parental strain, suggesting that Brp exerts a repressor role in antibiotic biosynthesis. EMSA assays using affinity chromatography extracts from the deletion mutant <jats:italic>S. clavuligerus Δbrp::neo</jats:italic>1 lacked a high‐mobility band‐shift due to Brp but still showed the slow‐mobility band‐shift observed in the wild‐type strain. These results indicate that two different proteins bind specifically to the ARE sequence and modulate clavulanic acid and cephamycin biosynthesis by its action on <jats:italic>ccaR</jats:italic> gene expression.

Knowledge Graph

Similar Paper

Different proteins bind to the butyrolactone receptor protein ARE sequence located upstream of the regulatory <i>ccaR</i> gene of <i>Streptomyces clavuligerus</i>
Molecular Microbiology 2005.0
Different proteins bind to the butyrolactone receptor protein ARE sequence located upstream of the regulatory <i>ccaR</i> gene of <i>Streptomyces clavuligerus</i>
Molecular Microbiology 2005.0
Connecting primary and secondary metabolism: AreB, an IclR‐like protein, binds the ARE<sub><i>ccaR</i></sub> sequence of <i>S. clavuligerus</i> and modulates leucine biosynthesis and cephamycin C and clavulanic acid production
Molecular Microbiology 2007.0
Characterization of DNA‐binding sequences for CcaR in the cephamycin–clavulanic acid supercluster of <i>Streptomyces clavuligerus</i>
Molecular Microbiology 2011.0
Morphological differentiation and clavulanic acid formation are affected in a Streptomyces clavuligerus adpA-deleted mutant
Microbiology 2010.0
The claR gene of Streptomyces clavuligerus, encoding a LysR-type regulatory protein controlling clavulanic acid biosynthesis, is linked to the clavulanate-9-aldehyde reductase (car) gene
Gene 1998.0
The claR gene of Streptomyces clavuligerus, encoding a LysR-type regulatory protein controlling clavulanic acid biosynthesis, is linked to the clavulanate-9-aldehyde reductase (car) gene
Gene 1998.0
Expression of<i>ccaR</i>, Encoding the Positive Activator of Cephamycin C and Clavulanic Acid Production in<i>Streptomyces clavuligerus</i>, Is Dependent on<i>bldG</i>
Antimicrobial Agents and Chemotherapy 2005.0
Role of the cmcH–ccaR intergenic region and ccaR overexpression in cephamycin C biosynthesis in Streptomyces clavuligerus
Applied Microbiology and Biotechnology 2013.0
An <i>rplK</i><sup>Δ29‐PALG‐32</sup> mutation leads to reduced expression of the regulatory genes <i>ccaR</i> and <i>claR</i> and very low transcription of the <i>ceaS2</i> gene for clavulanic acid biosynthesis in <i>Streptomyces clavuligerus</i>
Molecular Microbiology 2006.0