Interspecies Interactions Stimulate Diversification of the Streptomyces coelicolor Secreted Metabolome

mBio
2013.0

Abstract

<jats:title>ABSTRACT</jats:title> <jats:p> Soils host diverse microbial communities that include filamentous actinobacteria (actinomycetes). These bacteria have been a rich source of useful metabolites, including antimicrobials, antifungals, anticancer agents, siderophores, and immunosuppressants. While humans have long exploited these compounds for therapeutic purposes, the role these natural products may play in mediating interactions between actinomycetes has been difficult to ascertain. As an initial step toward understanding these chemical interactions at a systems level, we employed the emerging techniques of nanospray desorption electrospray ionization (NanoDESI) and matrix-assisted laser desorption ionization–time of flight (MALDI-TOF) imaging mass spectrometry to gain a global chemical view of the model bacterium <jats:named-content content-type="genus-species">Streptomyces coelicolor</jats:named-content> interacting with five other actinomycetes. In each interaction, the majority of secreted compounds associated with <jats:named-content content-type="genus-species">S. coelicolor</jats:named-content> colonies were unique, suggesting an idiosyncratic response from <jats:named-content content-type="genus-species">S. coelicolor</jats:named-content> . Spectral networking revealed a family of unknown compounds produced by <jats:named-content content-type="genus-species">S. coelicolor</jats:named-content> during several interactions. These compounds constitute an extended suite of at least 12 different desferrioxamines with acyl side chains of various lengths; their production was triggered by siderophores made by neighboring strains. Taken together, these results illustrate that chemical interactions between actinomycete bacteria exhibit high complexity and specificity and can drive differential secondary metabolite production. <jats:p> <jats:bold>IMPORTANCE</jats:bold> Actinomycetes, filamentous actinobacteria from the soil, are the deepest natural source of useful medicinal compounds, including antibiotics, antifungals, and anticancer agents. There is great interest in developing new strategies that increase the diversity of metabolites secreted by actinomycetes in the laboratory. Here we used several metabolomic approaches to examine the chemicals made by these bacteria when grown in pairwise coculture. We found that these interspecies interactions stimulated production of numerous chemical compounds that were not made when they grew alone. Among these compounds were at least 12 different versions of a molecule called desferrioxamine, a siderophore used by the bacteria to gather iron. Many other compounds of unknown identity were also observed, and the pattern of compound production varied greatly among the interaction sets. These findings suggest that chemical interactions between actinomycetes are surprisingly complex and that coculture may be a promising strategy for finding new molecules from actinomycetes.

Knowledge Graph

Similar Paper

Interspecies Interactions Stimulate Diversification of the Streptomyces coelicolor Secreted Metabolome
mBio 2013.0
Interspecies Interactions Stimulate Diversification of the Streptomyces coelicolor Secreted Metabolome
mBio 2013.0
Integrated Metabolomics Approach Facilitates Discovery of an Unpredicted Natural Product Suite from <i>Streptomyces coelicolor</i> M145
ACS Chemical Biology 2013.0
Imaging mass spectrometry and MS/MS molecular networking reveals chemical interactions among cuticular bacteria and pathogenic fungi associated with fungus-growing ants
Scientific Reports 2017.0
The secreted metabolome of <i>Streptomyces chartreusis</i> and implications for bacterial chemistry
Proceedings of the National Academy of Sciences 2018.0
The secreted metabolome of <i>Streptomyces chartreusis</i> and implications for bacterial chemistry
Proceedings of the National Academy of Sciences 2018.0
Production of fungal and bacterial growth modulating secondary metabolites is widespread among mycorrhiza-associated streptomycetes
BMC Microbiology 2012.0
Characterization and mapping of secondary metabolites of Streptomyces sp. from caatinga by desorption electrospray ionization mass spectrometry (DESI–MS)
Analytical and Bioanalytical Chemistry 2018.0
Production of Induced Secondary Metabolites by a Co-Culture of Sponge-Associated Actinomycetes, Actinokineospora sp. EG49 and Nocardiopsis sp. RV163
Marine Drugs 2014.0
Production of Induced Secondary Metabolites by a Co-Culture of Sponge-Associated Actinomycetes, Actinokineospora sp. EG49 and Nocardiopsis sp. RV163
Marine Drugs 2014.0