Identification of a selective inhibitor of transforming growth factor β-activated kinase 1 by biosensor-based screening of focused libraries

Bioorganic & Medicinal Chemistry Letters
2017.0

Abstract

Transforming growth factor-β activated kinase 1 (TAK1), a member of the mitogen-activated protein kinase kinase kinase family, plays an essential role in mediating signals from various pro-inflammatory cytokines and therefore may be a good target for developing anti-inflammation agents. Herein, we report our efforts to identify TAK1 inhibitors with a good selectivity profile with which to initiate medicinal chemistry. Instead of resorting to a high-throughput screening campaign, we performed biosensor-based biophysical screening for a limited number of compounds by taking advantage of existing knowledge on kinase inhibitors. Rather than focusing on one specific inhibition mode, we searched for three different types, Type I (ATP-competitive, DFG-in), Type II (DFG-out), and Type III binders (non-ATP competitive) in parallel, and succeeded in identifying candidates in all three categories efficiently and rapidly. Finally, the biosensor-based binding kinetics for the active and inactive forms of TAK1 were measured to prioritize the Type I and Type II inhibitors. The effort resulted in the identification of a new TAK1-selective Type I compound with a thienopyrimidine scaffold that served as a good starting point for medicinal chemistry.

Knowledge Graph

Similar Paper

Identification of a selective inhibitor of transforming growth factor β-activated kinase 1 by biosensor-based screening of focused libraries
Bioorganic & Medicinal Chemistry Letters 2017.0
Discovery of 2,4-1H-Imidazole Carboxamides as Potent and Selective TAK1 Inhibitors
ACS Medicinal Chemistry Letters 2021.0
Identification of Novel Inhibitors of the Transforming Growth Factor β1 (TGF-β1) Type 1 Receptor (ALK5)
Journal of Medicinal Chemistry 2002.0
Through the “Gatekeeper Door”: Exploiting the Active Kinase Conformation
Journal of Medicinal Chemistry 2010.0
Mitogen-Activated Protein Kinase-Activated Protein Kinase 2 (MAPKAP-K2) as an Antiinflammatory Target: Discovery and in Vivo Activity of Selective Pyrazolo[1,5-a]pyrimidine Inhibitors Using a Focused Library and Structure-Based Optimization Approach
Journal of Medicinal Chemistry 2012.0
Design and Synthesis of Pyrazole-Based Macrocyclic Kinase Inhibitors Targeting BMPR2
ACS Medicinal Chemistry Letters 2023.0
Comprehensive analysis of kinase inhibitor selectivity
Nature Biotechnology 2011.0
Screening serine/threonine and tyrosine kinase inhibitors for histidine kinase inhibition
Bioorganic & Medicinal Chemistry 2018.0
Successful shape-Based virtual screening: The discovery of a potent inhibitor of the type I TGFβ receptor kinase (TβRI)
Bioorganic & Medicinal Chemistry Letters 2003.0
Identification and SAR of a new series of thieno[3,2-d]pyrimidines as Tpl2 kinase inhibitors
Bioorganic & Medicinal Chemistry Letters 2011.0